Metabarcoding of pelagic communities in french's marinas

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• Brandt, M. I., B. Trouche, L. Quintric, B. Gunther, P. Wincker, J. Poulain, and S. Arnaud-Haond. 2021. Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding. Mol Ecol Resour 21:1904-1921

  Brandt, M. I., B. Trouche, L. Quintric, B. Gunther, P. Wincker, J. Poulain, and S. Arnaud-Haond. 2021. Bioinformatic pipelines combining denoising and…
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• Couton, M., Baud, A., Daguin‐Thiébaut, C., Corre, E., Comtet, T., & Viard, F. 2021. High‐throughput sequencing on preservative ethanol is effective at jointly examining infraspecific and taxonomic diversity, although bioinformatics pipelines do not perform equally. Ecology and Evolution. doi:10.1002/ece3.7453

  Couton, M., Baud, A., Daguin‐Thiébaut, C., Corre, E., Comtet, T., & Viard, F. 2021. High‐throughput sequencing on preservative ethanol is effective at jointly…
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• Couton, M., Lévêque, L., Daguin-Thiébaut, C., Comtet, T., & Viard, F. 2022. Water eDNA metabarcoding is effective in detecting non-native species in marinas, but detection errors still hinder its use for passive monitoring. Biofouling, 38(4), 367-383. doi:10.1080/08927014.2022.2075739

  Couton, M., Lévêque, L., Daguin-Thiébaut, C., Comtet, T., & Viard, F. 2022. Water eDNA metabarcoding is effective in detecting non-native species in marinas,…
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• Leray, M., Yang, J.Y., Meyer, C.P. et al. A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents. Front Zool 10, 34 (2013). https://doi.org/10.1186/1742-9994-10-34

  Leray, M., Yang, J.Y., Meyer, C.P. et al. A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan…
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• Sinniger, F., J. Pawlowski, S. Harii, A. J. Gooday, H. Yamamoto, P. Chevaldonné, T. Cedhagen, G. Carvalho, and S. Creer. 2016. Worldwide Analysis of Sedimentary DNA Reveals Major Gaps in Taxonomic Knowledge of Deep-Sea Benthos. Frontiers in Marine Science 3. https://doi.org/10.3389/fmars.2016.00092

  Sinniger, F., J. Pawlowski, S. Harii, A. J. Gooday, H. Yamamoto, P. Chevaldonné, T. Cedhagen, G. Carvalho, and S. Creer. 2016. Worldwide Analysis of Sedimentary…
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